User Guide

You can either use BEaTmap’s “envelope” function that will automatically execute the whole process of a BET analysis and returns the results in form of informative plots and tables, or you can call the individual functions yourself. The latter is useful if you want more control over the process and possibly want to use the results for further analysis.

If you prefer to go through this guide in the IPython notebook format, there’s on in the GitHub repository. Click here to view the notebook.

• Basic Usage
• Advanced Usage